| MirGeneDB ID | Aga-Mir-957 |
|---|
| Family name |
MIR-957 (all species) |
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| Seed |
GAAACCG |
|---|
| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
aga-mir-957
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-957
Dan-Mir-957
Dme-Mir-957
Dmo-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
Gpa-Mir-957
|
|---|
| Node of Origin (locus) |
Diptera
|
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| Node of Origin (family) |
Diptera
|
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064602.1: 72792735-72792800 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCAUCAAAACAAACCUGAUCACUGCGUGCGUUAGUUUUGGGCGGGUUUUAGUGUAUUUCGAUGAGAAUUCUAUUGAAACCGUCCAAAACUGAGGCUGGCAGAUGGUCACAGUUCAUCAAAAAUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUCAUCAAAACAAACCU- -| GU G G GUAUUUCGA
GAUCA CUGC GC UUAGUUUUGGGCGG UUUUAGU \
CUGGU GACG CG AGUCAAAACCUGCC AAAGUUA U
UAUAAAAACUACUUGACA A^ GU G - UCUUAAGAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
| |
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| Star sequence |
Aga-Mir-957_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GUUAGUUUUGGGCGGGUUUUAGU -23
Get sequence
|
|---|
| Mature sequence |
Aga-Mir-957_3p |
| mirBase accession | MIMAT0010106 |
|---|
| Sequence |
44- UGAAACCGUCCAAAACUGAGGC -66
Get sequence
|
|---|
