MirGeneDB ID | Aga-Mir-957 |
Family name |
MIR-957 (all species) |
Seed |
GAAACCG |
Species |
African malaria mosquito (Anopheles gambiae) |
MiRBase ID |
aga-mir-957
|
Paralogues |
|
Orthologues |
Aae-Mir-957
Dan-Mir-957
Dme-Mir-957
Dmo-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
Gpa-Mir-957
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Diptera
|
Genome context (GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064602.1: 72792735-72792800 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCAUCAAAACAAACCUGAUCACUGCGUGCGUUAGUUUUGGGCGGGUUUUAGUGUAUUUCGAUGAGAAUUCUAUUGAAACCGUCCAAAACUGAGGCUGGCAGAUGGUCACAGUUCAUCAAAAAUAU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUCAUCAAAACAAACCU- -| GU G G GUAUUUCGA
GAUCA CUGC GC UUAGUUUUGGGCGG UUUUAGU \
CUGGU GACG CG AGUCAAAACCUGCC AAAGUUA U
UAUAAAAACUACUUGACA A^ GU G - UCUUAAGAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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Star sequence |
Aga-Mir-957_5p* |
mirBase accession | None |
Sequence |
0- GUUAGUUUUGGGCGGGUUUUAGU -23
Get sequence
|
Mature sequence |
Aga-Mir-957_3p |
mirBase accession | MIMAT0010106 |
Sequence |
44- UGAAACCGUCCAAAACUGAGGC -66
Get sequence
|