MirGeneDB ID | Aae-Mir-92-P4 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-92b
|
Paralogues |
Aae-Mir-92-P3
|
Orthologues |
Aga-Mir-92-P4
Asu-Mir-92
Bfl-Mir-92-o4
Bge-Mir-92-P4
Bla-Mir-92-o4
Cel-Mir-92
Dan-Mir-92-P4
Dlo-Mir-92-P4
Dma-Mir-92-P4
Dme-Mir-92-P4
Dmo-Mir-92-P4
Dpu-Mir-92-P4
Dsi-Mir-92-P4
Dya-Mir-92-P4
Esc-Mir-92
Gpa-Mir-92-P4
Gsp-Mir-92
Hme-Mir-92-P4
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Tca-Mir-92-P4
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Bilateria
|
Genome context (Aaeg_L3) |
supercont1.116: 1319161-1319222 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUGAGCAGGAAAGGUUAGGGCUCCGAAUGUAGGUCGUGACUUGUGCCCGUUUGCUGAAUUUUAAUGGUCAAAUUGCACUUGUCCCGGCCUGCAGCCAAGAGCCAGAGCAUCGCCAACGUUGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUGAGCAGGAAAGGUUAG- CGAA-| U UU CC CUGAAUU
GGCUC UGUAGGUCG GAC GUGC GUUUG \
CCGAG ACGUCCGGC CUG CACG UAAAC U
AGUUGCAACCGCUACGAGA AACCG^ C UU U- UGGUAAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Aae-Mir-92-P4_5p* |
mirBase accession | MIMAT0014321 |
Sequence |
0- AGGUCGUGACUUGUGCCCGUUUG -23
Get sequence
|
Mature sequence |
Aae-Mir-92-P4_3p |
mirBase accession | MIMAT0014322 |
Sequence |
40- AAUUGCACUUGUCCCGGCCUGC -62
Get sequence
|