MirGeneDB 3.0

MirGeneDB ID

Bge-Mir-92-P4

Family name MIR-92 (all species)
Seed AUUGCAC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-92-P3  Bge-Mir-92-P14  Bge-Mir-92-P15 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ615620.1: 336987-337043 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUUCUUUUCACCACUGGUGAGCAGCACAGGCCGUGUCAGGUGCACUUUGUAAUAUUCGCUCAAAUUGCACUUGUCCCGGCCUGCCUUGCCCACGCUUUCACAAGUUUUCAAUCA
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Structure
        10          20        30        40        50        
CUGCUUCUUUUCACCACUG--|  A    CA       UGU        C    UAAUA 
                     GUG GCAG  CAGGCCG   CAGGUGCA UUUG     \
                     CAC CGUU  GUCCGGC   GUUCACGU AAAC     U
ACUAACUUUUGAACACUUUCG^  C    CC       CCU        U    UCGCU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Bge-Mir-92-P4_5p*

mirBase accessionNone
Sequence
0- AGGCCGUGUCAGGUGCACUUUG -22
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Mature sequence

Bge-Mir-92-P4_3p

mirBase accessionNone
Sequence
35- AAUUGCACUUGUCCCGGCCUGC -57
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