MirGeneDB ID | Bge-Mir-92-P4 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
|
Paralogues |
Bge-Mir-92-P3
Bge-Mir-92-P14
Bge-Mir-92-P15
|
Orthologues |
Aae-Mir-92-P4
Aga-Mir-92-P4
Asu-Mir-92
Bfl-Mir-92-o4
Bla-Mir-92-o4
Cel-Mir-92
Dan-Mir-92-P4
Dlo-Mir-92-P4
Dma-Mir-92-P4
Dme-Mir-92-P4
Dmo-Mir-92-P4
Dpu-Mir-92-P4
Dsi-Mir-92-P4
Dya-Mir-92-P4
Esc-Mir-92
Gpa-Mir-92-P4
Gsp-Mir-92
Hme-Mir-92-P4
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Tca-Mir-92-P4
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Bilateria
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Genome context (Bger_2.0) |
KZ615620.1: 336987-337043 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CUGCUUCUUUUCACCACUGGUGAGCAGCACAGGCCGUGUCAGGUGCACUUUGUAAUAUUCGCUCAAAUUGCACUUGUCCCGGCCUGCCUUGCCCACGCUUUCACAAGUUUUCAAUCA
Get precursor sequence
|
Structure | 10 20 30 40 50
CUGCUUCUUUUCACCACUG--| A CA UGU C UAAUA
GUG GCAG CAGGCCG CAGGUGCA UUUG \
CAC CGUU GUCCGGC GUUCACGU AAAC U
ACUAACUUUUGAACACUUUCG^ C CC CCU U UCGCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Star sequence |
Bge-Mir-92-P4_5p* |
mirBase accession | None |
Sequence |
0- AGGCCGUGUCAGGUGCACUUUG -22
Get sequence
|
Mature sequence |
Bge-Mir-92-P4_3p |
mirBase accession | None |
Sequence |
35- AAUUGCACUUGUCCCGGCCUGC -57
Get sequence
|