MirGeneDB 3.0

MirGeneDB ID

Bge-Mir-92-P14

Family name MIR-92 (all species)
Seed AUUGCAC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-92-P3  Bge-Mir-92-P4  Bge-Mir-92-P15 
Orthologues Asu-Mir-92  Cel-Mir-92  Dlo-Mir-92-P14  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Spu-Mir-92-o14  Tca-Mir-92-P14 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ616963.1: 116285-116343 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACAACAUGAAGAUGUUGCUAGCUCCUUUCAGGCUGUGACUUGUGCAAGUUUUGUGAUAUAUGAUCAAAUUGCACUUGUCCCGGCCUGAAGGUACUAGUUUGACACAUGCUCAUCCCAU
Get precursor sequence
Structure
        10           20        30        40        50          
AACAACAUGAAGAUGUU---|    CU    U       U   UU      GU    UGAUA 
                    GCUAG  CCUU CAGGCUG GAC  GUGCAA  UUUG     \
                    UGAUC  GGAA GUCCGGC CUG  CACGUU  AAAC     U
UACCCUACUCGUACACAGUU^    AU    -       C   UU      --    UAGUA 
       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-92-P14_5p*

mirBase accessionNone
Sequence
0- AGGCUGUGACUUGUGCAAGUUUUG -24
Get sequence
Mature sequence

Bge-Mir-92-P14_3p

mirBase accessionNone
Sequence
37- AAUUGCACUUGUCCCGGCCUGA -59
Get sequence