MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-92-P14

Family name MIR-92 (all species)
Seed AUUGCAC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-92c
Paralogues Tca-Mir-92-P3  Tca-Mir-92-P4 
Orthologues Asu-Mir-92  Bge-Mir-92-P14  Cel-Mir-92  Dlo-Mir-92-P14  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Spu-Mir-92-o14 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LG7: 1817556-1817612 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P14)		 Mir-92-P14 LG7: 1817556-1817612 [+] Ensembl
Mir-7 LG7: 1856524-1856585 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAACAUUUUCGAGGAUGGAACGGUCGGUUGGGUCGUGAUUUGUGCAAAUAUGUUAUUUCGUUCAUAUUGCACCAGUCCCGGCCUGACUGCUCUUCCAGGACCACGCCGGGGUGUUG
Get precursor sequence
Structure
        10           20        30        40        50        
UUAACAUUUUCGAGGAU---|   C  U    UG     U    U      A    UUAU 
                    GGAA GG CGGU  GGUCG GAUU GUGCAA UAUG    U
                    CCUU UC GUCA  CCGGC CUGA CACGUU AUAC    U
GUUGUGGGGCCGCACCAGGA^   C  -    GU     C    C      -    UUGC 
     110       100         90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-92-P14_5p*
mirBase accessionMIMAT0018786
Sequence 
0- GGGUCGUGAUUUGUGCAAAUAUG -23
Get sequence
Mature sequence

Tca-Mir-92-P14_3p
mirBase accessionMIMAT0018787
Sequence 
35- UAUUGCACCAGUCCCGGCCUGA -57
Get sequence