MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-92-P4

Family name MIR-92 (all species)
Seed AUUGCAC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-92b
Paralogues Tca-Mir-92-P3  Tca-Mir-92-P14 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LG8: 3039554-3039615 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)		 Mir-92-P3 LG8: 3039003-3039061 [+] Ensembl
Mir-92-P4 LG8: 3039554-3039615 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCGUUUCAUGCUGAAGGCUGUGUCGUUUAGGUCGUGUCUUGUGCAACUUGUGGUUUUUUCAUUAGUCAAAUUGCACUUGUCCCGGCCUGCAAGGCACAGUCACGCCAUCUCUAAUAUUAA
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Structure
        10          20        30        40        50        60
GUCCGUUUCAUGCUGAA--|        GUU       UGUCUU      C   UGGUUUU 
                   GGCUGUGUC   UAGGUCG      GUGCAA UUG       U
                   CUGACACGG   GUCCGGC      CACGUU AAC       U
AAUUAUAAUCUCUACCGCA^        AAC       CCUGUU      A   UGAUUAC 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-92-P4_5p*
mirBase accessionMIMAT0019112
Sequence 
0- AGGUCGUGUCUUGUGCAACUUG -22
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Mature sequence

Tca-Mir-92-P4_3p
mirBase accessionMIMAT0008368
Sequence 
40- AAUUGCACUUGUCCCGGCCUGC -62
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