MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-92-P4

Family name MIR-92 (all species)
Seed AUUGCAC
Species Fruit fly (Drosophila ananassae)
MiRBase ID dan-mir-92b
Paralogues Dan-Mir-92-P3  Dan-Mir-92-P5  Dan-Mir-92-P6  Dan-Mir-92-P7  Dan-Mir-92-P8 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)		 scaffold_13340: 3732660-3732721 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)		 Mir-92-P3 scaffold_13340: 3727792-3727850 [+] Ensembl
Mir-92-P4 scaffold_13340: 3732660-3732721 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGUGAAGCAUUAAAACGUCACCUGAUGUAGGCCGUGCCCGGUGCUUAUUUGUUACUUUUGGAAAUACAAAUUGCACUAGUCCCGGCCUGCAGUGAGUGUCAAAGGCAGCUAUCUUCACUG
Get precursor sequence
Structure
        10              20        30         40        50        60 
GCAGUGAAGCAUUAAAACG------|   CUGA         U-  CC     UU     UUACUUU 
                         UCAC    UGUAGGCCG  GC  GGUGC  AUUUG       \
                         AGUG    ACGUCCGGC  UG  UCACG  UAAAC       U
GUCACUUCUAUCGACGGAAACUGUG^   ----         CC  A-     U-     AUAAAGG 
120       110       100            90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe
Star sequence

Dan-Mir-92-P4_5p*
mirBase accessionNone
Sequence 
0- AGGCCGUGCCCGGUGCUUAUUUG -23
Get sequence
Mature sequence

Dan-Mir-92-P4_3p
mirBase accessionMIMAT0008405
Sequence 
40- AAUUGCACUAGUCCCGGCCUGC -62
Get sequence