MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-92-P6

Family name MIR-92 (all species)
Seed AUUGCAC
Species Fruit fly (Drosophila ananassae)
MiRBase ID dan-mir-311a
Paralogues Dan-Mir-92-P3  Dan-Mir-92-P4  Dan-Mir-92-P5  Dan-Mir-92-P7  Dan-Mir-92-P8 
Orthologues Asu-Mir-92  Bfl-Mir-92-o6  Bla-Mir-92-o6  Cel-Mir-92  Dme-Mir-92-P6  Dmo-Mir-92-P6  Dsi-Mir-92-P6  Dya-Mir-92-P6a  Dya-Mir-92-P6b  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)
scaffold_13266: 4132944-4133001 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P6)
Mir-7 scaffold_13266: 4109379-4109440 [-] Ensembl
Mir-92-P7 scaffold_13266: 4132688-4132749 [+] Ensembl
Mir-92-P6 scaffold_13266: 4132944-4133001 [+] Ensembl
Mir-92-P5 scaffold_13266: 4133064-4133125 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAGAAAUAUUUGUUGCCAGAUUAUCUUCAGGACGGUAUUUGUGUCAAUAUGGAUAUUUCAAACAUAUUGCACUUAUACCGGCCUGAUGAUCUCCGGCGCUCGUCAUCUGUGACUAA
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Structure
        10           20        30        40        50         
GAGAGAAAUAUUUGUUG---| A  UU   U     A      UU   U       GAUAU 
                    CC GA  AUC UCAGG CGGUAU  GUG CAAUAUG     \
                    GG CU  UAG AGUCC GCCAUA  CAC GUUAUAC     U
AAUCAGUGUCUACUGCUCGC^ C  C-   U     G      UU   -       AAACU 
      110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Star sequence

Dan-Mir-92-P6_5p*

mirBase accessionNone
Sequence
0- AGGACGGUAUUUGUGUCAAUAUG -23
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Mature sequence

Dan-Mir-92-P6_3p

mirBase accessionMIMAT0008471
Sequence
36- UAUUGCACUUAUACCGGCCUGA -58
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