MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-92-P5

Family name MIR-92 (all species)
Seed AUUGCAC
Species Fruit fly (Drosophila ananassae)
MiRBase ID dan-mir-310
Paralogues Dan-Mir-92-P3  Dan-Mir-92-P4  Dan-Mir-92-P6  Dan-Mir-92-P7  Dan-Mir-92-P8 
Orthologues Asu-Mir-92  Bfl-Mir-92-o5  Bla-Mir-92-o5  Cel-Mir-92  Dme-Mir-92-P5  Dmo-Mir-92-P5  Dsi-Mir-92-P5  Dya-Mir-92-P5  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)
scaffold_13266: 4133064-4133125 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P5)
Mir-7 scaffold_13266: 4109379-4109440 [-] Ensembl
Mir-92-P7 scaffold_13266: 4132688-4132749 [+] Ensembl
Mir-92-P6 scaffold_13266: 4132944-4133001 [+] Ensembl
Mir-92-P5 scaffold_13266: 4133064-4133125 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCGAAAAUAGCAAAACAUAAACACUUGCAGGACGGGGAGCGUGACAAUAUAUAUAUUUUAUAAACAUAUAUUGCACACCUCCCGGCCUAUAAGUGUAAAUGUUCCUACAGGUAAAACUUC
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Structure
        10          20        30        40         50        60 
GUGCGAAAAUAGCAAAA--|  AA       C   ACG     C   A-       UAUAUUU 
                   CAU  ACACUUG AGG   GGGAG GUG  CAAUAUA       \
                   GUA  UGUGAAU UCC   CCCUC CAC  GUUAUAU       U
CUUCAAAAUGGACAUCCUU^  AA       A   GG-     -   AC       ACAAAUA 
120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe
Star sequence

Dan-Mir-92-P5_5p*

mirBase accessionNone
Sequence
0- AGGACGGGGAGCGUGACAAUAUA -23
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Mature sequence

Dan-Mir-92-P5_3p

mirBase accessionMIMAT0008425
Sequence
40- UAUUGCACACCUCCCGGCCUAU -62
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