MirGeneDB ID | Dmo-Mir-92-P5 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
Dmo-Mir-92-P3
Dmo-Mir-92-P4
Dmo-Mir-92-P6
Dmo-Mir-92-P8
|
Orthologues |
Asu-Mir-92
Bfl-Mir-92-o5
Bla-Mir-92-o5
Cel-Mir-92
Dan-Mir-92-P5
Dme-Mir-92-P5
Dsi-Mir-92-P5
Dya-Mir-92-P5
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Bilateria
|
Genome context (Dmoj_caf1) |
scaffold_6496: 9090312-9090376 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUAAAUAUCGUUUAAAUGUAUCCAUUUUUAGGCCGUGCUAUGUGACAAUAUGUAUUUAAAUUGUAUUUAUCAUAUUGCACAUCUCCCGGCCUACAAGUGUAAAUGCACAAUUCAACUAUGUACA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUAAAUAUCGUUUAAAU C--| U UGCU A UAUUUAAA
GUAU CAUUU UAGGCCG AUGUG CAAUAUG U
CGUA GUGAA AUCCGGC UACAC GUUAUAC U
ACAUGUAUCAACUUAACA AAU^ C CCUC - UAUUUAUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dmo-Mir-92-P5_5p* |
mirBase accession | None |
Sequence |
0- AGGCCGUGCUAUGUGACAAUAUG -23
Get sequence
|
Mature sequence |
Dmo-Mir-92-P5_3p |
mirBase accession | None |
Sequence |
43- UAUUGCACAUCUCCCGGCCUAC -65
Get sequence
|