| MirGeneDB ID | Gpa-Mir-92-P4 |
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| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-92-o62
Gpa-Mir-92-P3
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| Orthologues |
Aae-Mir-92-P4
Aga-Mir-92-P4
Asu-Mir-92
Bfl-Mir-92-o4
Bge-Mir-92-P4
Bla-Mir-92-o4
Cel-Mir-92
Dan-Mir-92-P4
Dlo-Mir-92-P4
Dma-Mir-92-P4
Dme-Mir-92-P4
Dmo-Mir-92-P4
Dpu-Mir-92-P4
Dsi-Mir-92-P4
Dya-Mir-92-P4
Esc-Mir-92
Gsp-Mir-92
Hme-Mir-92-P4
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Tca-Mir-92-P4
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| Node of Origin (locus) |
Pancrustacea
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| Node of Origin (family) |
Bilateria
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Genome context
(GpalI1) |
Scaffold58: 1294167-1294231 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUUUUUUUUUCUUUUGGUCACACAGUAUGUAGACCGUGCCUAGUGCUUAUUUGUGACAUUUUAAUUUAAUUCAAAUUGCACUAGUCCCGGCCUGCAAAUUGUGACUUUAUCAGCAUUAUAUAAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUUUUUUUUUCUUUUGGUCA--| A A UGC UU UGACAUUU
CACAGU UGUAG CCG CUAGUGC AUUUG U
GUGUUA ACGUC GGC GAUCACG UAAAC A
AAAAUAUAUUACGACUAUUUCA^ A C CCU U- UUAAUUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Gpa-Mir-92-P4_5p* |
| mirBase accession | None |
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| Sequence |
0- AGACCGUGCCUAGUGCUUAUUUG -23
Get sequence
|
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| Mature sequence |
Gpa-Mir-92-P4_3p |
| mirBase accession | None |
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| Sequence |
43- AAUUGCACUAGUCCCGGCCUGC -65
Get sequence
|
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