MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-92-P4

Family name MIR-92 (all species)
Seed AUUGCAC
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-92b
Paralogues Hme-Mir-92-P3 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Hmel_1)		 HE672043: 129073-129130 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)		 Mir-92-P3 HE672043: 128928-128983 [+] Ensembl
Mir-92-P4 HE672043: 129073-129130 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGGUCGUUCACAGCGGUGGCCACGCAUAGGACGUGAUUCGGUGUAAACGUUGUGAUCCUACCACAUUGCACCAAUCCCGGCCUGCACGCGGCCUCGGCUCUGGUAGCUGAUCAGC
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Structure
        10           20        30        40        50         
GGCCGGUCGUUCACAGC---| U    A  CA    A  U    C       ACGUUGUGA 
                    GG GGCC CG  UAGG CG GAUU GGUGUAA         \
                    CU CCGG GC  GUCC GC CUAA CCACGUU         U
CGACUAGUCGAUGGUCUCGG^ -    C  AC    G  C    -       ACACCAUCC 
      110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-92-P4_5p*
mirBase accessionNone
Sequence 
0- AGGACGUGAUUCGGUGUAAACG -22
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Mature sequence

Hme-Mir-92-P4_3p
mirBase accessionMIMAT0024994
Sequence 
36- CAUUGCACCAAUCCCGGCCUGC -58
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