MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-92-P3

Family name MIR-92 (all species)
Seed AUUGCAC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-92a
Paralogues Tca-Mir-92-P4  Tca-Mir-92-P14 
Orthologues Aae-Mir-92-P3  Aga-Mir-92-P3  Asu-Mir-92  Bfl-Mir-92-o3  Bge-Mir-92-P3  Bla-Mir-92-o3  Cel-Mir-92  Dan-Mir-92-P3  Dlo-Mir-92-P3  Dma-Mir-92-P3  Dme-Mir-92-P3  Dmo-Mir-92-P3  Dpu-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Gpa-Mir-92-P3  Gsp-Mir-92  Hme-Mir-92-P3  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LG8: 3039003-3039061 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P3)		 Mir-92-P3 LG8: 3039003-3039061 [+] Ensembl
Mir-92-P4 LG8: 3039554-3039615 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAUUUGAGGUUAAAGUUCGCGCUUUCAGUAGUCCGUGAUGCGUGACAAUAUUUAGUUUUUUUCGAAUAUUGCACUAGUCCCGGCCUAUUGAGGGCGCGAGCAUCGCCGUCACGUGUGU
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Structure
        10          20        30        40        50         
UUAUUUGAGGUUAAAGU--|              U   U   GC   A       UAGUU 
                   UCGCGCUUUCAGUAG CCG GAU  GUG CAAUAUU     U
                   AGCGCGGGAGUUAUC GGC CUG  CAC GUUAUAA     U
UGUGUGCACUGCCGCUACG^              C   C   AU   -       GCUUU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-92-P3_5p*
mirBase accessionMIMAT0019111
Sequence 
0- AGUCCGUGAUGCGUGACAAUAUU -23
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Mature sequence

Tca-Mir-92-P3_3p
mirBase accessionMIMAT0008367
Sequence 
37- UAUUGCACUAGUCCCGGCCUAU -59
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