MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-92-o3

Family name MIR-92 (all species)
Seed AUUGCAC
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-92-o1  Bla-Mir-92-o2  Bla-Mir-92-o4  Bla-Mir-92-o5  Bla-Mir-92-o6  Bla-Mir-92-o7  Bla-Mir-92-o8 
Orthologues Aae-Mir-92-P3  Aga-Mir-92-P3  Asu-Mir-92  Bfl-Mir-92-o3  Bge-Mir-92-P3  Cel-Mir-92  Dan-Mir-92-P3  Dlo-Mir-92-P3  Dma-Mir-92-P3  Dme-Mir-92-P3  Dmo-Mir-92-P3  Dpu-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Gpa-Mir-92-P3  Gsp-Mir-92  Hme-Mir-92-P3  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P3 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000007: 2890028-2890081 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAAUGUAGCGGUUUUGUUUUUGGCGGGAAGGUCGGGAUAAGGAACAAUGUUUCCCGCCGAUAUUGCACUUGUCCCGGCUUGCCUGCUGCCGCCAUCUUGCUCCAUCGGACCU
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Structure
        10        20          30        40        50       
UGGAAUGUAGCGGUUUUGUUUUU--|     A             GAA       UCC 
                         GGCGGG AGGUCGGGAUAAG   CAAUGUU   \
                         UCGUCC UUCGGCCCUGUUC   GUUAUAG   C
UCCAGGCUACCUCGUUCUACCGCCG^     G             AC-       CCG 
  110       100        90        80        70         60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending new data.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Bla-Mir-92-o3_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUCGGGAUAAGGAACAAUGUU -23
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Mature sequence

Bla-Mir-92-o3_3p
mirBase accessionNone
Sequence 
32- UAUUGCACUUGUCCCGGCUUGC -54
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