MirGeneDB 3.0

MirGeneDB ID

Bge-Mir-92-P3

Family name MIR-92 (all species)
Seed GUCCGUG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-92-P4  Bge-Mir-92-P14  Bge-Mir-92-P15 
Orthologues Aae-Mir-92-P3  Aga-Mir-92-P3  Asu-Mir-92  Bfl-Mir-92-o3  Bla-Mir-92-o3  Cel-Mir-92  Dan-Mir-92-P3  Dlo-Mir-92-P3  Dma-Mir-92-P3  Dme-Mir-92-P3  Dmo-Mir-92-P3  Dpu-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Gpa-Mir-92-P3  Gsp-Mir-92  Hme-Mir-92-P3  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P3 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ615620.1: 336862-336921 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCGGAGAUUCACAAAUGCAGUCGUGGUCAGUCCGUGACUUGUGGCAAUAUUAUCAUUGUAUACAAAUAUUGCACUUGUCCCGGCCUAUCCAAGGCAGUACUUCGACGGCGUGGAUCUC
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Structure
        10          20        30        40        50          
AGUCGGAGAUUCACAAA--|  A   G   UC  U   U   UU   G       AUCAUU 
                   UGC GUC UGG  AG CCG GAC  GUG CAAUAUU      \
                   AUG CGG ACC  UC GGC CUG  CAC GUUAUAA      G
CUCUAGGUGCGGCAGCUUC^  A   A   UA  C   C   UU   -       ACAUAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-92-P3_5p

mirBase accessionNone
Sequence
0- AGUCCGUGACUUGUGGCAAUAUU -23
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Co-mature sequence

Bge-Mir-92-P3_3p

mirBase accessionNone
Sequence
38- UAUUGCACUUGUCCCGGCCUAU -60
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