MirGeneDB ID | Bge-Mir-92-P3 |
Family name |
MIR-92 (all species) |
Seed |
GUCCGUG |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
|
Paralogues |
Bge-Mir-92-P4
Bge-Mir-92-P14
Bge-Mir-92-P15
|
Orthologues |
Aae-Mir-92-P3
Aga-Mir-92-P3
Asu-Mir-92
Bfl-Mir-92-o3
Bla-Mir-92-o3
Cel-Mir-92
Dan-Mir-92-P3
Dlo-Mir-92-P3
Dma-Mir-92-P3
Dme-Mir-92-P3
Dmo-Mir-92-P3
Dpu-Mir-92-P3
Dsi-Mir-92-P3
Dya-Mir-92-P3
Esc-Mir-92
Gpa-Mir-92-P3
Gsp-Mir-92
Hme-Mir-92-P3
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Tca-Mir-92-P3
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Bilateria
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Genome context (Bger_2.0) |
KZ615620.1: 336862-336921 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGUCGGAGAUUCACAAAUGCAGUCGUGGUCAGUCCGUGACUUGUGGCAAUAUUAUCAUUGUAUACAAAUAUUGCACUUGUCCCGGCCUAUCCAAGGCAGUACUUCGACGGCGUGGAUCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AGUCGGAGAUUCACAAA--| A G UC U U UU G AUCAUU
UGC GUC UGG AG CCG GAC GUG CAAUAUU \
AUG CGG ACC UC GGC CUG CAC GUUAUAA G
CUCUAGGUGCGGCAGCUUC^ A A UA C C UU - ACAUAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Mature sequence |
Bge-Mir-92-P3_5p |
mirBase accession | None |
Sequence |
0- AGUCCGUGACUUGUGGCAAUAUU -23
Get sequence
|
Co-mature sequence |
Bge-Mir-92-P3_3p |
mirBase accession | None |
Sequence |
38- UAUUGCACUUGUCCCGGCCUAU -60
Get sequence
|