MirGeneDB ID | Bge-Mir-92-P15 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
|
Paralogues |
Bge-Mir-92-P3
Bge-Mir-92-P4
Bge-Mir-92-P14
|
Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Spu-Mir-92-o15
|
Node of Origin (locus) |
B. germanica
|
Node of Origin (family) |
Bilateria
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Genome context (Bger_2.0) |
KZ614500.1: 94957-95013 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AAAACGGAAUGGAUAUCACUGGUUCCUUUCAGGAUAUGACAUUUGCAAAUUUUGUGAUUUAAAAAAUUGCACUUGUUAUAUUCUUGAAAGCACCAGAGUAGCACCAAGAUGUCCUUA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAACGGAAUGGAUAUCA---| UC - UU A UGUG
CUGGU CUUUCAGGA UAUGACA UGCAA UUU A
GACCA GAAAGUUCU AUAUUGU ACGUU AAA U
AUUCCUGUAGAACCACGAUGA^ C- U UC A AAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UGUG in loop |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Star sequence |
Bge-Mir-92-P15_5p* |
mirBase accession | None |
Sequence |
0- AGGAUAUGACAUUUGCAAAUUU -22
Get sequence
|
Mature sequence |
Bge-Mir-92-P15_3p |
mirBase accession | None |
Sequence |
34- AAUUGCACUUGUUAUAUUCUUGA -57
Get sequence
|