MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-92-P3

Family name MIR-92 (all species)
Seed AUUGCAC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-92a
Paralogues Dme-Mir-92-P4  Dme-Mir-92-P5  Dme-Mir-92-P6  Dme-Mir-92-P7  Dme-Mir-92-P8 
Orthologues Aae-Mir-92-P3  Aga-Mir-92-P3  Asu-Mir-92  Bfl-Mir-92-o3  Bge-Mir-92-P3  Bla-Mir-92-o3  Cel-Mir-92  Dan-Mir-92-P3  Dlo-Mir-92-P3  Dma-Mir-92-P3  Dmo-Mir-92-P3  Dpu-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Gpa-Mir-92-P3  Gsp-Mir-92  Hme-Mir-92-P3  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P3 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Drosophila_melanogaster_BDGP6)
3R: 25646522-25646581 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P3)
Mir-92-P3 3R: 25646522-25646581 [+] UCSC Ensembl
Mir-92-P4 3R: 25651416-25651478 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAGCCGAAUAUAAAUAUGAAUUUCCCGUAGGACGGGAAGGUGUCAACGUUUUGCAUUUCGAAUAAACAUUGCACUUGUCCCGGCCUAUGGGCGGUUUGUAAUAAACAACUAAAAUCUA
Get precursor sequence
Structure
        10          20        30         40        50         
UUCAGCCGAAUAUAAAU-- UG   UU        A     -|    U   C   UUGCAU 
                   A  AAU  CCCGUAGG CGGGA AGGUG CAA GUU      U
                   U  UUG  GGGUAUCC GCCCU UUCAC GUU CAA      U
AUCUAAAAUCAACAAAUAA GU   GC        G     G^    -   A   AUAAGC 
.       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-92-P3_5p*

mirBase accessionMIMAT0020802
Sequence
0- AGGACGGGAAGGUGUCAACGUU -22
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Mature sequence

Dme-Mir-92-P3_3p

mirBase accessionMIMAT0000334
Sequence
38- CAUUGCACUUGUCCCGGCCUAU -60
Get sequence
Proposed targets microrna.org: MIMAT0000334
TargetScanFly: dme-miR-92a