MirGeneDB ID | Dlo-Mir-92-P3 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-92-P4
Dlo-Mir-92-P14
|
Orthologues |
Aae-Mir-92-P3
Aga-Mir-92-P3
Asu-Mir-92
Bfl-Mir-92-o3
Bge-Mir-92-P3
Bla-Mir-92-o3
Cel-Mir-92
Dan-Mir-92-P3
Dma-Mir-92-P3
Dme-Mir-92-P3
Dmo-Mir-92-P3
Dpu-Mir-92-P3
Dsi-Mir-92-P3
Dya-Mir-92-P3
Esc-Mir-92
Gpa-Mir-92-P3
Gsp-Mir-92
Hme-Mir-92-P3
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Tca-Mir-92-P3
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087237.1: 6571106-6571166 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGAUUUUUAAUGAUUAAUUGCAUGAGAGAUAGGUCGAGAUAUGUGACAAUGUUUCCAUGAUCUUUGUAAUAUUGCACUUGUCCCGGCCUAUCGAAGUGCAGAAAUUUCGACAGUUUUUCUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGAUUUUUAAUGAUUAA---| GAGA A U A UCCAUG
UUGCAU GAUAGGUCG GAUA GUG CAAUGUU A
GACGUG CUAUCCGGC CUGU CAC GUUAUAA U
UUCUUUUUGACAGCUUUAAA^ AAG- C U - UGUUUC
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-92-P3_5p* |
mirBase accession | None |
Sequence |
0- AGGUCGAGAUAUGUGACAAUGUU -23
Get sequence
|
Mature sequence |
Dlo-Mir-92-P3_3p |
mirBase accession | None |
Sequence |
39- UAUUGCACUUGUCCCGGCCUAU -61
Get sequence
|