MirGeneDB ID | Dlo-Mir-92-P14 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-92-P3
Dlo-Mir-92-P4
|
Orthologues |
Asu-Mir-92
Bge-Mir-92-P14
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Spu-Mir-92-o14
Tca-Mir-92-P14
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087242.1: 3628866-3628926 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUGGAGGAAUAAAAAUUUGUGUUCUUACUCAGGUCUAGACACUUGCAACUUUGUGUUUCUUUAUUUUCAAAUUGCACCUGUCCCGGCCUGACCGCGAGCACGCCAUCAUCGAGGUGUCGAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUGGAGGAAUAAAAAUUU--| UUAC UA CU C GUGUUUC
GUGUUC UCAGGUC GACA UGCAA UUU U
CACGAG AGUCCGG CUGU ACGUU AAA U
AAGCUGUGGAGCUACUACCG^ CGCC CC CC - CUUUUAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Dlo-Mir-92-P14_5p* |
mirBase accession | None |
Sequence |
0- AGGUCUAGACACUUGCAACUUU -22
Get sequence
|
Mature sequence |
Dlo-Mir-92-P14_3p |
mirBase accession | None |
Sequence |
39- AAUUGCACCUGUCCCGGCCUGA -61
Get sequence
|