MirGeneDB ID | Aae-Mir-970 |
Family name |
MIR-970 (all species) |
Seed |
CAUAAGA |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-970
|
Paralogues |
|
Orthologues |
Aga-Mir-970
Dan-Mir-970
Dme-Mir-970
Dmo-Mir-970
Dsi-Mir-970
Dya-Mir-970
Gpa-Mir-970
Hme-Mir-970
Tca-Mir-970
|
Node of Origin (locus) |
Aparaglossata
|
Node of Origin (family) |
Aparaglossata
|
Genome context (Aaeg_L3) |
supercont1.229: 1045835-1045895 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUAGUAACGGUAUUGCGGCUUUCAUAGGUAGCUUGCGUUUGUCUUAGCUGGUAUUGAAUGUGAUAGGUAUCAUAAGACACACGCGGCUAUUUUUGAGAGUAUCAAGCAUCUUGUAAAAAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUUAGUAACGGUAUUGCG--| U U U GC UUGAAU
GCUUUCA AGGUAGCU GCGU UGUCUUA UGGUA G
UGAGAGU UUUAUCGG CGCA ACAGAAU ACUAU U
CAAAAAUGUUCUACGAACUA^ U - C -- GGAUAG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Aae-Mir-970_5p* |
mirBase accession | None |
Sequence |
0- AGCUUGCGUUUGUCUUAGCUGGUA -24
Get sequence
|
Mature sequence |
Aae-Mir-970_3p |
mirBase accession | MIMAT0014292 |
Sequence |
40- UCAUAAGACACACGCGGCUAU -61
Get sequence
|