MirGeneDB 3.0

MirGeneDB ID

Dmo-Mir-970

Family name MIR-970 (all species)
Seed CAUAAGA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Aae-Mir-970  Aga-Mir-970  Dan-Mir-970  Dme-Mir-970  Dsi-Mir-970  Dya-Mir-970  Gpa-Mir-970  Hme-Mir-970  Tca-Mir-970 
Node of Origin (locus) Aparaglossata
Node of Origin (family) Aparaglossata
Genome context
(Dmoj_caf1)
scaffold_6328: 940009-940073 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGACUAUGAAAACAAUUGACGUCUGUUGUAGCCAGCGGAUGUUUUAUUUGGUAGUUGUAUUUUAUAAAGUCUAUCAUAAGACACACGCGGCUAUAACAGAACUGUUCAAUAAGCAACCUAACCC
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Structure
        10        20          30        40        50        60   
UCGACUAUGAAAACAAUU    --|           A   GA       UU     GUUGUAUU 
                  GACG  UCUGUUGUAGCC GCG  UGUUUUA  UGGUA        U
                  UUGU  AGACAAUAUCGG CGC  ACAGAAU  ACUAU        U
CCCAAUCCAACGAAUAAC    CA^           -   AC       --     CUGAAAUA 
   120       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-970_5p*

mirBase accessionNone
Sequence
0- AGCCAGCGGAUGUUUUAUUUGGUA -24
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Mature sequence

Dmo-Mir-970_3p

mirBase accessionNone
Sequence
44- UCAUAAGACACACGCGGCUAU -65
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