MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-970

Family name MIR-970 (all species)
Seed CAUAAGA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-970
Paralogues
Orthologues Aae-Mir-970  Aga-Mir-970  Dan-Mir-970  Dme-Mir-970  Dmo-Mir-970  Dsi-Mir-970  Dya-Mir-970  Gpa-Mir-970  Hme-Mir-970 
Node of Origin (locus) Aparaglossata
Node of Origin (family) Aparaglossata
Genome context
(Tcas5.2)		 LG2: 10959586-10959647 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGAACCAUGAAGAUAAACGAUGCCGGCGGCAGCUCAGCGUGUGUCGUACUGAUAGUGUUAUCACUAGCUAUCAUAAGACACACGCGGCUAUCGCCGGUCUCUCCUAUCCUUUUGAUUUUAUU
Get precursor sequence
Structure
        10           20        30        40        50        60 
CGAACCAUGAAGAUAAAC---| U       GC    CA         GUAC     GUGUUA 
                     GA GCCGGCG  AGCU  GCGUGUGUC    UGAUA      U
                     CU UGGCCGC  UCGG  CGCACACAG    ACUAU      C
UUAUUUUAGUUUUCCUAUCCU^ C       UA    --         AAU-     CGAUCA 
120       110       100        90          80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-970_5p*
mirBase accessionMIMAT0019179
Sequence 
0- AGCUCAGCGUGUGUCGUACUGAUA -24
Get sequence
Mature sequence

Tca-Mir-970_3p
mirBase accessionMIMAT0010092
Sequence 
40- UCAUAAGACACACGCGGCUAUC -62
Get sequence