| MirGeneDB ID | Aae-Mir-2796 |
|---|
| Family name |
MIR-2796 (all species) |
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| Seed |
UAGGCCG |
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| Species |
Yellow fever mosquito (Aedes aegypti) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aga-Mir-2796
Bge-Mir-2796
Dlo-Mir-2796
Hme-Mir-2796
Tca-Mir-2796
|
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| Node of Origin (locus) |
Neoptera
|
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| Node of Origin (family) |
Neoptera
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Genome context
(Aaeg_L3) |
supercont1.309: 120075-120135 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACUCGUUACAUAUGAGAAAAUCGAAGGAAGAAGGGGUUUCUUUCGGCCUCCAGCGGCAUUAGAAAGUUGUAGGCCGGCGGAAACUACUUGCUUCCGUCGUUUAAAAACAUCUGAUUAAUAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACUCGUUACAUAUGAGA--| U A - GG U C CGGCAU
AAA CGA GGAAG AAG GUUUCU UCGGCCU CAG \
UUU GCU CCUUC UUC CAAAGG GGCCGGA GUU U
AAUAAUUAGUCUACAAAAA^ - G G AU C U GAAAGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Aae-Mir-2796_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AAGGGGUUUCUUUCGGCCUCCAG -23
Get sequence
|
|---|
| Mature sequence |
Aae-Mir-2796_3p |
| mirBase accession | None |
|---|
| Sequence |
38- GUAGGCCGGCGGAAACUACUUGC -61
Get sequence
|
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