| MirGeneDB ID | Aga-Mir-2796 |
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| Family name |
MIR-2796 (all species) |
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| Seed |
UAGGCCG |
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| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
aga-mir-2796
|
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| Paralogues |
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| Orthologues |
Aae-Mir-2796
Bge-Mir-2796
Dlo-Mir-2796
Hme-Mir-2796
Tca-Mir-2796
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 22148090-22148149 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGUACGGACCAAGCGGGCGGUUCCGGGGGCAGGGGUUUCUUUCGGCCUCCAGCAGCAUUUGACCGUUGUAGGCCGGCGGAAACUACUUGCUUCCGUCGUUCCCGUUCUACAAGGAAAGGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGUACGGACCAAGCGGGC UUC-- -| U C AGCAU
GG CGGGGGCAGG GGUUUCU UCGGCCU CAGC \
CC GCCUUCGUUC UCAAAGG GGCCGGA GUUG U
AGGAAAGGAACAUCUUGC UUGCU A^ C U CCAGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Aga-Mir-2796_5p* (predicted) |
| mirBase accession | MIMAT0041533 |
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| Sequence |
0- AGGGGUUUCUUUCGGCCUCCAGCAG -25
Get sequence
|
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| Mature sequence |
Aga-Mir-2796_3p |
| mirBase accession | MIMAT0041534 |
|---|
| Sequence |
37- GUAGGCCGGCGGAAACUACUUGC -60
Get sequence
|
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