MirGeneDB ID | Bge-Mir-2796 |
Family name |
MIR-2796 (all species) |
Seed |
UAGGCCG |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aae-Mir-2796
Aga-Mir-2796
Dlo-Mir-2796
Hme-Mir-2796
Tca-Mir-2796
|
Node of Origin (locus) |
Neoptera
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Node of Origin (family) |
Neoptera
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Genome context (Bger_2.0) |
KZ614480.1: 87921-87980 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CUUUCAUCCGAAAGUCAACGGCUCAGGGGCAGGGGUUUCUUUCGGCCUCCAGCCGACAUGGAAUGUUGUAGGCCGGCGGAAACUACUUGCCUCUGAGCCACAAACCAUGCAAUAGACUGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUUCAUCCGAAAGUCAAC-- -| U C CCGACA
GGCUCAGGGGCAGG GGUUUCU UCGGCCU CAG \
CCGAGUCUCCGUUC UCAAAGG GGCCGGA GUU U
CGUCAGAUAACGUACCAAACA A^ C U GUAAGG
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Star sequence |
Bge-Mir-2796_5p* |
mirBase accession | None |
Sequence |
0- AGGGGUUUCUUUCGGCCUCCAG -22
Get sequence
|
Mature sequence |
Bge-Mir-2796_3p |
mirBase accession | None |
Sequence |
37- GUAGGCCGGCGGAAACUACUUGC -60
Get sequence
|