MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-316

Family name MIR-316 (all species)
Seed GUCUUUU
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-316
Paralogues
Orthologues Aga-Mir-316  Bge-Mir-316  Dan-Mir-316  Dme-Mir-316  Dmo-Mir-316  Dsi-Mir-316  Dya-Mir-316  Gpa-Mir-316  Hme-Mir-316  Tca-Mir-316 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Aaeg_L3)		 supercont1.289: 891286-891348 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUGCUCAGAACCAACAUUUUGAUUGAUUUGUCUUUUUCCGCUUACUGCCGGUGGCAUUUGAAAUUCUCGACAGCAAACCGAAAAAGGCGCCUCAAUCAAUUUAAGUCAUCCGGCGAGAGCA
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Structure
        10        20          30        40        50        60 
CUCUGCUCAGAACCAACAUU--|       UU          CGCUUA   C  GUGGCAUU 
                      UUGAUUGA  UGUCUUUUUC      CUG CG        \
                      AACUAACU  GCGGAAAAAG      GAC GC        U
ACGAGAGCGGCCUACUGAAUUU^       CC          CCAAAC   A  UCUUAAAG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ge Ge So So To To To
Mature sequence

Aae-Mir-316_5p
mirBase accessionMIMAT0014317
Sequence 
0- UGUCUUUUUCCGCUUACUGCCG -22
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Star sequence

Aae-Mir-316_3p*
mirBase accessionNone
Sequence 
41- ACAGCAAACCGAAAAAGGCGCC -63
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