| MirGeneDB ID | Dan-Mir-316 |
|---|
| Family name |
MIR-316 (all species) |
|---|
| Seed |
GUCUUUU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
dan-mir-316
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-316
Aga-Mir-316
Bge-Mir-316
Dme-Mir-316
Dmo-Mir-316
Dsi-Mir-316
Dya-Mir-316
Gpa-Mir-316
Hme-Mir-316
Tca-Mir-316
|
|---|
| Node of Origin (locus) |
Pancrustacea
|
|---|
| Node of Origin (family) |
Pancrustacea
|
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Genome context
(Dana_caf1) |
scaffold_13337: 3985769-3985828 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAAGAACAUAUAUUCAAAUUCUAGUCGAUUUGUCUUUUUCCGCUUACUGGCGUUUAAUUCAAACAACGACAGGAAAGGGAAAAAGGCGUAUUUACUAUGAGUUUGGUCAACAUUUCGUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAGAACAUAUAUUCAA- -| C U G A- G UUUAAU
AUUC UAGU GAU UGUCUUUUUCC CUU CUG CG U
UGAG AUCA UUA GCGGAAAAAGG GAA GAC GC C
ACUGCUUUACAACUGGUU U^ U U - AG A AACAAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Dan-Mir-316_5p |
| mirBase accession | MIMAT0008449 |
|---|
| Sequence |
0- UGUCUUUUUCCGCUUACUGGCG -22
Get sequence
|
|---|
| Star sequence |
Dan-Mir-316_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- ACAGGAAAGGGAAAAAGGCGUA -60
Get sequence
|
|---|
