MirGeneDB 3.0

MirGeneDB ID

Bge-Mir-316

Family name MIR-316 (all species)
Seed GUCUUUU
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-316  Aga-Mir-316  Dan-Mir-316  Dme-Mir-316  Dmo-Mir-316  Dsi-Mir-316  Dya-Mir-316  Gpa-Mir-316  Hme-Mir-316  Tca-Mir-316 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Bger_2.0)
KZ614922.1: 160984-161046 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGGAGAAGAGAGCAAAGGUCUGUGGAUGUGUCUUUUUCCGCUUUGCUGCCGCUGUUGUUUAGAGAUUCGACAGCAAAGUGGAAGAGGCCGAUUCAUGGGGCAAGAAUCUUCUGUUUCAUCU
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Structure
        10        20          30        40        50        60 
UUUGGAGAAGAGAGCAAAGG--|        G  U                 C  CUGUUGU 
                      UCUGUGGAU UG CUUUUUCCGCUUUGCUG CG       U
                      GGGUACUUA GC GGAGAAGGUGAAACGAC GC       U
UCUACUUUGUCUUCUAAGAACG^        -  C                 A  UUAGAGA 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Mature sequence

Bge-Mir-316_5p

mirBase accessionNone
Sequence
0- UGUCUUUUUCCGCUUUGCUGCCG -23
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Star sequence

Bge-Mir-316_3p*

mirBase accessionNone
Sequence
41- ACAGCAAAGUGGAAGAGGCCGA -63
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