| MirGeneDB ID | Hme-Mir-316 |
|---|
| Family name |
MIR-316 (all species) |
|---|
| Seed |
GUCUUUU |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
hme-mir-316
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-316
Aga-Mir-316
Bge-Mir-316
Dan-Mir-316
Dme-Mir-316
Dmo-Mir-316
Dsi-Mir-316
Dya-Mir-316
Gpa-Mir-316
Tca-Mir-316
|
|---|
| Node of Origin (locus) |
Pancrustacea
|
|---|
| Node of Origin (family) |
Pancrustacea
|
|---|
Genome context
(Hmel_1) |
HE671816: 56648-56709 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAACACUAAGAAGACAGUUCUCGAUAAAUUUGUCUUUUUCCGCUUUGCUGCUGAUUGUUAUGAAAUCUCAACAGCAAAGUGAAAAGGUCUCCUUUAUCAGAACGUUCUACGUGCAAAAUUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAACACUAAGAAGACAG---| C UUUGU C C AUUGUUA
UUCU GAUAAA CUUUUUC GCUUUGCUG UG \
AAGA CUAUUU GGAAAAG UGAAACGAC AC U
GAUUAAAACGUGCAUCUUGC^ - CCUCU - A UCUAAAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Hme-Mir-316_5p |
| mirBase accession | MIMAT0024978 |
|---|
| Sequence |
0- UGUCUUUUUCCGCUUUGCUGCUG -23
Get sequence
|
|---|
| Star sequence |
Hme-Mir-316_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- ACAGCAAAGUGAAAAGGUCUCC -62
Get sequence
|
|---|
