MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-316

Family name MIR-316 (all species)
Seed GUCUUUU
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-316
Paralogues
Orthologues Aae-Mir-316  Aga-Mir-316  Bge-Mir-316  Dan-Mir-316  Dme-Mir-316  Dmo-Mir-316  Dya-Mir-316  Gpa-Mir-316  Hme-Mir-316  Tca-Mir-316 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3L: 21078000-21078059 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAGUGGAUACACAAAUUCUAGUCGAUUUGUCUUUUUCCGCUUACUGGCGUUUCAUUUCCACAACGACAGGAAAGGGAAAAAGGCGUAUUUACUAUGAGUUUGCCCAGCGACUUGCAG
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Structure
        10         20         30        40         50         
GAAAAGUGGAUACACAA-    -|   C   U           G   A-   G  UUUCAU 
                  AUUC UAGU GAU UGUCUUUUUCC CUU  CUG CG      U
                  UGAG AUCA UUA GCGGAAAAAGG GAA  GAC GC      U
GACGUUCAGCGACCCGUU    U^   U   U           -   AG   A  AACACC 
.       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Mature sequence

Dsi-Mir-316_5p
mirBase accessionMIMAT0008869
Sequence 
0- UGUCUUUUUCCGCUUACUGGCG -22
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Star sequence

Dsi-Mir-316_3p*
mirBase accessionNone
Sequence 
38- ACAGGAAAGGGAAAAAGGCGUA -60
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