MirGeneDB ID | Aae-Mir-276-P1 |
Family name |
MIR-276 (all species) |
Seed |
AGGAACU |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-276-2
|
Paralogues |
Aae-Mir-276-P2
|
Orthologues |
Aga-Mir-276-P1
Bge-Mir-276
Dan-Mir-276-P1
Dlo-Mir-276
Dma-Mir-276
Dme-Mir-276-P1
Dmo-Mir-276-P1
Dpu-Mir-276
Dsi-Mir-276-P1
Dya-Mir-276-P1
Gpa-Mir-276-P1
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
Tur-Mir-276
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Arthropoda
|
Genome context (Aaeg_L3) |
supercont1.5: 2769509-2769572 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAGAUUUCCAGUGUCUCGAGUUAAUCCGUCAGCGAGGUAUAGAGUUCCUAUGCGUUCGGAUAAAAUAUUCCAUAGGAACUUCAUACCGUGCUCUUGGAUUGCUUGGAAGUCAUCGAGAGGGUAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UAGAUUUCCAGUGUCUC---| U UC A AG CGUUCGGA
GAGU AAUCCG AGCG GGUAU AGUUCCUAUG U
UUCG UUAGGU UCGU CCAUA UCAAGGAUAC A
AAUGGGAGAGCUACUGAAGG^ - UC G CU CUUAUAAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Aae-Mir-276-P1_5p* |
mirBase accession | None |
Sequence |
0- AGCGAGGUAUAGAGUUCCUAUG -22
Get sequence
|
Mature sequence |
Aae-Mir-276-P1_3p |
mirBase accession | MIMAT0014223 |
Sequence |
42- UAGGAACUUCAUACCGUGCUCU -64
Get sequence
|