MirGeneDB 3.0
MirGeneDB ID

Dpu-Mir-276

Family name MIR-276 (all species)
Seed AGGAACU
Species Common water flea (Daphnia pulex)
MiRBase ID dpu-mir-276
Paralogues
Orthologues Aae-Mir-276-P1  Aae-Mir-276-P2  Aga-Mir-276-P1  Aga-Mir-276-P2  Bge-Mir-276  Csc-Mir-276-P10  Csc-Mir-276-P11a  Csc-Mir-276-P11b  Dan-Mir-276-P1  Dan-Mir-276-P2  Dlo-Mir-276  Dma-Mir-276  Dme-Mir-276-P1  Dme-Mir-276-P2  Dmo-Mir-276-P1  Dmo-Mir-276-P2  Dsi-Mir-276-P1  Dsi-Mir-276-P2  Dya-Mir-276-P1  Dya-Mir-276-P2  Gpa-Mir-276-P1  Gpa-Mir-276-P2  Hme-Mir-276  Isc-Mir-276  Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P7  Lpo-Mir-276-P8  Lpo-Mir-276-P9  Tca-Mir-276  Tca-Mir-276-as  Tur-Mir-276 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_15: 755618-755688 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCGUCGUCGAAUGGAUGUGACGUGUCGCUAGCGAGGUAUAGAGUUCCUACGUCUUGUCACUGAAUUCAAGUCGAUUGGUAGGAACUUCAUACCGUGCUCUCGACGCCAAUCCGAUAGUCUCCGAUUCAUC
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Structure
        10        20          30        40        50        60     
AUCGUCGUCGAAUGGAUGUGAC--|     CU    A     AG         GUCUUGUCACUGA 
                        GUGUCG  AGCG GGUAU  AGUUCCUAC             \
                        CGCAGC  UCGU CCAUA  UCAAGGAUG             A
CUACUUAGCCUCUGAUAGCCUAAC^     UC    G     CU         GUUAGCUGAACUU 
 .       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Dpu-Mir-276_5p*
mirBase accessionNone
Sequence 
0- AGCGAGGUAUAGAGUUCCUACG -22
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Mature sequence

Dpu-Mir-276_3p
mirBase accessionMIMAT0012652
Sequence 
49- UAGGAACUUCAUACCGUGCUCU -71
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