| MirGeneDB ID | Gpa-Mir-276-P2 |
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| Family name |
MIR-276 (all species) |
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| Seed |
AGGAACU |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-276-P1
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| Orthologues |
Aae-Mir-276-P2
Aga-Mir-276-P2
Bge-Mir-276
Dan-Mir-276-P2
Dlo-Mir-276
Dma-Mir-276
Dme-Mir-276-P2
Dmo-Mir-276-P2
Dpu-Mir-276
Dsi-Mir-276-P2
Dya-Mir-276-P2
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
Tur-Mir-276
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| Node of Origin (locus) |
Diptera
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| Node of Origin (family) |
Arthropoda
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Genome context
(GpalI1) |
Scaffold69: 779761-779821 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAAACGUAACAAAAACUGGUUUACGCCAUAAGCGAGGUAUAGAGUUCCUACGUUAUAAUAUAUUAUCUGUAGGAACUUCAUACCGUGCUCUUGGAGAGCCAAUAAACAACUUUCAAAUAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAAACGUAACAAAAACU----| ACG UA A AG UUAUAAU
GGUUU CCA AGCG GGUAU AGUUCCUACG \
CCGAG GGU UCGU CCAUA UCAAGGAUGU A
GAAUAAACUUUCAACAAAUAA^ A-- UC G CU CUAUUAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Gpa-Mir-276-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCGAGGUAUAGAGUUCCUACG -22
Get sequence
|
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| Mature sequence |
Gpa-Mir-276-P2_3p |
| mirBase accession | None |
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| Sequence |
39- UAGGAACUUCAUACCGUGCUCU -61
Get sequence
|
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