MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-276

Family name MIR-276 (all species)
Seed AGGAACU
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-276
Paralogues
Orthologues Aae-Mir-276-P1  Aae-Mir-276-P2  Aga-Mir-276-P1  Aga-Mir-276-P2  Bge-Mir-276  Csc-Mir-276-P10  Csc-Mir-276-P11a  Csc-Mir-276-P11b  Dan-Mir-276-P1  Dan-Mir-276-P2  Dlo-Mir-276  Dma-Mir-276  Dme-Mir-276-P1  Dme-Mir-276-P2  Dmo-Mir-276-P1  Dmo-Mir-276-P2  Dpu-Mir-276  Dsi-Mir-276-P1  Dsi-Mir-276-P2  Dya-Mir-276-P1  Dya-Mir-276-P2  Gpa-Mir-276-P1  Gpa-Mir-276-P2  Isc-Mir-276  Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P7  Lpo-Mir-276-P8  Lpo-Mir-276-P9  Tca-Mir-276  Tca-Mir-276-as  Tur-Mir-276 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Hmel_1)		 HE671577: 38337-38393 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAGAAGAAAACACUGGUGAUUGCCACUAGCGAGGUAUAGAGUUCCUACGUAAUAUAGAACUGUAGGAACUUCAUACCGUGCUCUUGGGUUUGCCAAUGGUCUACAAUUCUAAUA
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Structure
        10           20        30        40        50        
GAAAAGAAGAAAACACU---| UG UUG   CU    A     AG          UAAUA 
                    GG  A   CCA  AGCG GGUAU  AGUUCCUACG     \
                    CC  U   GGU  UCGU CCAUA  UCAAGGAUGU     U
AUAAUCUUAACAUCUGGUAA^ GU UG-   UC    G     CU          CAAGA 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-276_5p*
mirBase accessionMIMAT0024954
Sequence 
0- AGCGAGGUAUAGAGUUCCUACG -22
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Mature sequence

Hme-Mir-276_3p
mirBase accessionNone
Sequence 
35- UAGGAACUUCAUACCGUGCUCU -57
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