MirGeneDB 3.0
MirGeneDB ID

Isc-Mir-276

Family name MIR-276 (all species)
Seed AGGAACU
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-276
Paralogues
Orthologues Aae-Mir-276-P1  Aae-Mir-276-P2  Aga-Mir-276-P1  Aga-Mir-276-P2  Bge-Mir-276  Csc-Mir-276-P10  Csc-Mir-276-P11a  Csc-Mir-276-P11b  Dan-Mir-276-P1  Dan-Mir-276-P2  Dlo-Mir-276  Dma-Mir-276  Dme-Mir-276-P1  Dme-Mir-276-P2  Dmo-Mir-276-P1  Dmo-Mir-276-P2  Dpu-Mir-276  Dsi-Mir-276-P1  Dsi-Mir-276-P2  Dya-Mir-276-P1  Dya-Mir-276-P2  Gpa-Mir-276-P1  Gpa-Mir-276-P2  Hme-Mir-276  Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P7  Lpo-Mir-276-P8  Lpo-Mir-276-P9  Tca-Mir-276  Tca-Mir-276-as  Tur-Mir-276 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GCF_016920785.2_ASM1692078v2_ISC)		 NW_024609884.1: 299896-299956 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUAUCGCUAGGGGAAGUCGCGCUAUCGCGAGCGGGGUACGGAGGUCUUACUGUGAGCGUCAAGCCAGCUAGGAACUUCAUACCAUGCUCGCUAUGGCAGACGACACGUUCUUCGGACAAG
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Structure
        10           20        30        40        50          
CGUAUCGCUAGGGGAAG---| GC     C       G    C    G     -  GUGAGC 
                    UC  GCUAU GCGAGCG GGUA GGAG UCUUA CU      G
                    AG  CGGUA CGCUCGU CCAU CUUC AGGAU GA      U
GAACAGGCUUCUUGCACAGC^ A-     U       A    A    A     C  CCGAAC 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Sa Sa To
Star sequence

Isc-Mir-276_5p*
mirBase accessionNone
Sequence 
0- AGCGGGGUACGGAGGUCUUACU -22
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Mature sequence

Isc-Mir-276_3p
mirBase accessionMIMAT0018919
Sequence 
39- UAGGAACUUCAUACCAUGCUCG -61
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