| MirGeneDB ID | Gpa-Mir-276-P1 |
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| Family name |
MIR-276 (all species) |
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| Seed |
AGGAACU |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-276-P2
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| Orthologues |
Aae-Mir-276-P1
Aga-Mir-276-P1
Bge-Mir-276
Dan-Mir-276-P1
Dlo-Mir-276
Dma-Mir-276
Dme-Mir-276-P1
Dmo-Mir-276-P1
Dpu-Mir-276
Dsi-Mir-276-P1
Dya-Mir-276-P1
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
Tur-Mir-276
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| Node of Origin (locus) |
Diptera
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| Node of Origin (family) |
Arthropoda
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Genome context
(GpalI1) |
Scaffold69: 987274-987339 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUAAACAAACAUGAAGCCUUUUUGCCAUAAGCGAGGUAUAGAGUUCCUACGUUCGAAAUUUUUAAAUAAUUCGUAGGAACUUAAUACCGUGCUCUUGGAGGGCUGUUGUUCAACACUAAUCAUUU
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GAUAAACAAACAUGAAG------| UUUG UA A A UUCGAAAUU
CCUU CCA AGCG GGUAU GAGUUCCUACG U
GGGA GGU UCGU CCAUA UUCAAGGAUGC U
UUUACUAAUCACAACUUGUUGUC^ ---- UC G A UUAAUAAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
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| Star sequence |
Gpa-Mir-276-P1_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCGAGGUAUAGAGUUCCUACG -22
Get sequence
|
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| Mature sequence |
Gpa-Mir-276-P1_3p |
| mirBase accession | None |
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| Sequence |
44- UAGGAACUUAAUACCGUGCUCU -66
Get sequence
|
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