MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-276

Family name MIR-276 (all species)
Seed AGGAACU
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-276
Paralogues
Orthologues Aae-Mir-276-P1  Aae-Mir-276-P2  Aga-Mir-276-P1  Aga-Mir-276-P2  Bge-Mir-276  Csc-Mir-276-P10  Csc-Mir-276-P11a  Csc-Mir-276-P11b  Dan-Mir-276-P1  Dan-Mir-276-P2  Dlo-Mir-276  Dma-Mir-276  Dme-Mir-276-P1  Dme-Mir-276-P2  Dmo-Mir-276-P1  Dmo-Mir-276-P2  Dpu-Mir-276  Dsi-Mir-276-P1  Dsi-Mir-276-P2  Dya-Mir-276-P1  Dya-Mir-276-P2  Gpa-Mir-276-P1  Gpa-Mir-276-P2  Hme-Mir-276  Isc-Mir-276  Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P7  Lpo-Mir-276-P8  Lpo-Mir-276-P9  Tca-Mir-276  Tca-Mir-276-as 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587306.1: 1311432-1311494 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCACGGACUCAUCAAGUGUUGGUAUCGCAAGCUCGGUGUGGAGUUUCUUACUGUGUUUUUGAACCAGAGGUAGGAACUUCAUACCAUGCUCGUGUUUACGAACUCAAUCAACAAUUUAAUCC
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Structure
        10         20         30        40        50        60 
AUCACGGACUCAUCAAGU-   G   U-|  A   UC           U      GUGUUUU 
                   GUU GUA  CGC AGC  GGUGUGGAGUU CUUACU       U
                   CAA CAU  GUG UCG  CCAUACUUCAA GGAUGG       G
CCUAAUUUAACAACUAACU   G   UU^  C   UA           -      AGACCAA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr
Star sequence

Tur-Mir-276_5p*
mirBase accessionMIMAT0023034
Sequence 
0- AGCUCGGUGUGGAGUUUCUUACU -23
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Mature sequence

Tur-Mir-276_3p
mirBase accessionMIMAT0023035
Sequence 
41- UAGGAACUUCAUACCAUGCUCG -63
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