MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-276-P2

Family name MIR-276 (all species)
Seed AGGAACU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-276
Paralogues Aga-Mir-276-P1 
Orthologues Aae-Mir-276-P2  Bge-Mir-276  Dan-Mir-276-P2  Dlo-Mir-276  Dma-Mir-276  Dme-Mir-276-P2  Dmo-Mir-276-P2  Dpu-Mir-276  Dsi-Mir-276-P2  Dya-Mir-276-P2  Gpa-Mir-276-P2  Hme-Mir-276  Isc-Mir-276  Tca-Mir-276  Tur-Mir-276 
Node of Origin (locus) Diptera
Node of Origin (family) Arthropoda
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064601.1: 87872556-87872618 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAACCAUUAAUAAGAGGUGACUGCCAUCAGCGAGGUAUAGAGUUCCUACGGUAAUCGAUUGAAACUUUGUAGGAACUUCAUACCGUGCUCUUGGAUAGCCGUUUACCAGCGUGUGUGUGAU
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Structure
        10            20        30        40        50        60 
UGCAACCAUUAAUAAGA----|  GACUG   UC    A     AG          GUAAUCGA 
                     GGU     CCA  AGCG GGUAU  AGUUCCUACG        \
                     CCG     GGU  UCGU CCAUA  UCAAGGAUGU        U
UAGUGUGUGUGCGACCAUUUG^  AUA--   UC    G     CU          UUCAAAGU 
 120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-276-P2_5p*

mirBase accessionMIMAT0001509
Sequence
0- AGCGAGGUAUAGAGUUCCUACG -22
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Mature sequence

Aga-Mir-276-P2_3p

mirBase accessionMIMAT0006782
Sequence
41- UAGGAACUUCAUACCGUGCUCU -63
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