MirGeneDB ID | Aga-Mir-276-P2 |
Family name |
MIR-276 (all species) |
Seed |
AGGAACU |
Species |
African malaria mosquito (Anopheles gambiae) |
MiRBase ID |
aga-mir-276
|
Paralogues |
Aga-Mir-276-P1
|
Orthologues |
Aae-Mir-276-P2
Bge-Mir-276
Dan-Mir-276-P2
Dlo-Mir-276
Dma-Mir-276
Dme-Mir-276-P2
Dmo-Mir-276-P2
Dpu-Mir-276
Dsi-Mir-276-P2
Dya-Mir-276-P2
Gpa-Mir-276-P2
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
Tur-Mir-276
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Arthropoda
|
Genome context (GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 87872556-87872618 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGCAACCAUUAAUAAGAGGUGACUGCCAUCAGCGAGGUAUAGAGUUCCUACGGUAAUCGAUUGAAACUUUGUAGGAACUUCAUACCGUGCUCUUGGAUAGCCGUUUACCAGCGUGUGUGUGAU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCAACCAUUAAUAAGA----| GACUG UC A AG GUAAUCGA
GGU CCA AGCG GGUAU AGUUCCUACG \
CCG GGU UCGU CCAUA UCAAGGAUGU U
UAGUGUGUGUGCGACCAUUUG^ AUA-- UC G CU UUCAAAGU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
|
|
|
|
|
|
|
|
|
|
Star sequence |
Aga-Mir-276-P2_5p* |
mirBase accession | MIMAT0001509 |
Sequence |
0- AGCGAGGUAUAGAGUUCCUACG -22
Get sequence
|
Mature sequence |
Aga-Mir-276-P2_3p |
mirBase accession | MIMAT0006782 |
Sequence |
41- UAGGAACUUCAUACCGUGCUCU -63
Get sequence
|