MirGeneDB ID | Aae-Mir-932 |
Family name |
MIR-932 (all species) |
Seed |
CAAUUCC |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-932
|
Paralogues |
|
Orthologues |
Aga-Mir-932
Bge-Mir-932
Dan-Mir-932
Dlo-Mir-932
Dme-Mir-932
Dmo-Mir-932
Dsi-Mir-932
Dya-Mir-932
Gpa-Mir-932
Hme-Mir-932
Tca-Mir-932
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Aaeg_L3) |
supercont1.1064: 154116-154175 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAUAGCCGUUUCUGUAAUCAUAGAAUAGCUUCAAUUCCGUAGUGCAUUGCAGUGUGCUUUAGACGAACUGCAAGCAAUGUGGAAGUGAAGCGAUUCUCAAUGAUCAUCAACAAUCUCAAG
Get precursor sequence
|
Structure | 10 20 30 40 50
GAUAGCCGUUUCUGUAAU --| A A G A GUGCUU
CAU AGAAU GCUUCA UUCCGUA UGC UUGCAGU \
GUA UCUUA CGAAGU AAGGUGU ACG AACGUCA U
GAACUCUAACAACUACUA AC^ G G A - AGCAGA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Aae-Mir-932_5p |
mirBase accession | MIMAT0014269 |
Sequence |
0- UCAAUUCCGUAGUGCAUUGCAGU -23
Get sequence
|
Star sequence |
Aae-Mir-932_3p* |
mirBase accession | MIMAT0014270 |
Sequence |
38- UGCAAGCAAUGUGGAAGUGAAG -60
Get sequence
|