MirGeneDB ID | Hme-Mir-932 |
Family name |
MIR-932 (all species) |
Seed |
CAAUUCC |
Species |
Longwing butterfly (Heliconius melpomene) |
MiRBase ID |
hme-mir-932
|
Paralogues |
|
Orthologues |
Aae-Mir-932
Aga-Mir-932
Bge-Mir-932
Dan-Mir-932
Dlo-Mir-932
Dme-Mir-932
Dmo-Mir-932
Dsi-Mir-932
Dya-Mir-932
Gpa-Mir-932
Tca-Mir-932
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Hmel_1) |
HE670498: 24471-24528 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAAAAGGCAAAGGAAAGGGCGCCGAGGCCUCAAUUCCGUAGUGCAUUGCAGUGCAUAUUGCCCCCUGCAAGCAGUGCGGAAGUGAGGCUGAGGUCUCCUUAAGCAACGUAUCAACAC
Get precursor sequence
|
Structure | 10 20 30 40 50
GAAAAAGGCAAAGGAAA--| C GA A G A UGCAUA
GGG GCC GGCCUCA UUCCGUA UGC UUGCAG \
CCU UGG UCGGAGU AAGGCGU ACG AACGUC U
CACAACUAUGCAACGAAUU^ C AG G G - CCCCGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Hme-Mir-932_5p |
mirBase accession | MIMAT0024995 |
Sequence |
0- UCAAUUCCGUAGUGCAUUGCAGU -23
Get sequence
|
Star sequence |
Hme-Mir-932_3p* |
mirBase accession | None |
Sequence |
36- UGCAAGCAGUGCGGAAGUGAGG -58
Get sequence
|