MirGeneDB ID | Gpa-Mir-932 |
Family name |
MIR-932 (all species) |
Seed |
CAAUUCC |
Species |
Tsetse fly (Glossina pallidipes) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aae-Mir-932
Aga-Mir-932
Bge-Mir-932
Dan-Mir-932
Dlo-Mir-932
Dme-Mir-932
Dmo-Mir-932
Dsi-Mir-932
Dya-Mir-932
Hme-Mir-932
Tca-Mir-932
|
Node of Origin (locus) |
Neoptera
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Node of Origin (family) |
Neoptera
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Genome context (GpalI1) |
Scaffold102: 630601-630664 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AAAAUGUAUACAACCAGCGCCGGGAAGUCUUCAAUUCCGUAGUGCAUUGCAGUUUGUCGAUUUAAUAAUUACUGCAAGCAUUGUGGAAAUGAUGAUUUUCUAGAGCACAAAUCAACAAAAAAAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAAAUGUAUACAACCAGC C--| U A A UUGUCGAU
GC GGGAAGUC UCA UUCCGUAGUGC UUGCAGU \
CG UCUUUUAG AGU AAGGUGUUACG AACGUCA U
AAAAAAAACAACUAAACA AGA^ U A - UUAAUAAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Mature sequence |
Gpa-Mir-932_5p |
mirBase accession | None |
Sequence |
0- UCAAUUCCGUAGUGCAUUGCAGU -23
Get sequence
|
Star sequence |
Gpa-Mir-932_3p* |
mirBase accession | None |
Sequence |
42- UGCAAGCAUUGUGGAAAUGAUG -64
Get sequence
|