MirGeneDB ID | Dsi-Mir-932 |
Family name |
MIR-932 (all species) |
Seed |
CAAUUCC |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-932
|
Paralogues |
|
Orthologues |
Aae-Mir-932
Aga-Mir-932
Bge-Mir-932
Dan-Mir-932
Dlo-Mir-932
Dme-Mir-932
Dmo-Mir-932
Dya-Mir-932
Gpa-Mir-932
Hme-Mir-932
Tca-Mir-932
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
2L: 6670325-6670385 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUUUCAAAAAAGGUAUUGGUUUUGAAGUUUUCAAUUCCGUAGUGCAUUGCAGUGUGUUUAAUUAUUUACUGCAAGCGCUGCGGAUUUGGCAACUUUGACGACCUUCAUCAUCUGCUAGAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AUUUCAAAAAAGGUAUU- -|UG U U A GUGUUU
GGUU U AAGUU UCAA UCCGUAGUGC UUGCAGU A
CCAG A UUCAA GGUU AGGCGUCGCG AACGUCA A
AGAGAUCGUCUACUACUU C^GU C U - UUUAUU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dsi-Mir-932_5p |
mirBase accession | MIMAT0012477 |
Sequence |
0- UCAAUUCCGUAGUGCAUUGCAGU -23
Get sequence
|
Star sequence |
Dsi-Mir-932_3p* |
mirBase accession | MIMAT0012478 |
Sequence |
39- UGCAAGCGCUGCGGAUUUGGCA -61
Get sequence
|