MirGeneDB 3.0

MirGeneDB ID

Adi-Mir-2022

Family name MIR-2022 (all species)
Seed GGACAAA
Species Stony coral (Acropora digitifera)
MiRBase ID
Paralogues
Orthologues Asp-Mir-2022-P1a  Asp-Mir-2022-P1b  Asp-Mir-2022-P1c  Hvu-Mir-2022  Nve-Mir-2022 
Node of Origin (locus) Cnidaria
Node of Origin (family) Cnidaria
Genome context
(GCA_000222465.2_Adig_1.1_genomic)
DF971589.1: 39817-39869 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUAUACCAGGACUUUUUCUGGUUAAGAAAUGGACAAAGGCUCCAAGCAAAUGUUUAUCAUUUGCUAGUUGCUUUUGUCCCGUUCUUAAACUAGAUAUUCAUAAGAAGUAGCU
Get precursor sequence
Structure
        10         20         30        40        50      
GAUAUACCAGGACUUUU-     -|      AU          UCCA        UU 
                  UCUGG UUAAGAA  GGACAAAGGC    AGCAAAUG  \
                  AGAUC AAUUCUU  CCUGUUUUCG    UCGUUUAC  U
UCGAUGAAGAAUACUUAU     A^      GC          UUGA        UA 
 110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ad Ad Ad Ad Ad La La
Mature sequence

Adi-Mir-2022_5p

mirBase accessionNone
Sequence
0- UGGACAAAGGCUCCAAGCAAAUG -23
Get sequence
Star sequence

Adi-Mir-2022_3p*

mirBase accessionNone
Sequence
30- UUUGCUAGUUGCUUUUGUCCCGU -53
Get sequence