| MirGeneDB ID | Adi-Mir-2022 |
|---|
| Family name |
MIR-2022 (all species) |
|---|
| Seed |
GGACAAA |
|---|
| Species |
Stony coral (Acropora digitifera) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
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| Orthologues |
Asp-Mir-2022-P1a
Asp-Mir-2022-P1b
Asp-Mir-2022-P1c
Hvu-Mir-2022
Nve-Mir-2022
|
|---|
| Node of Origin (locus) |
Cnidaria
|
|---|
| Node of Origin (family) |
Cnidaria
|
|---|
Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971589.1: 39817-39869 [-]
Ensembl
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|---|
Precursor
(pre-Mir +30nt flank) |
GAUAUACCAGGACUUUUUCUGGUUAAGAAAUGGACAAAGGCUCCAAGCAAAUGUUUAUCAUUUGCUAGUUGCUUUUGUCCCGUUCUUAAACUAGAUAUUCAUAAGAAGUAGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAUAUACCAGGACUUUU- -| AU UCCA UU
UCUGG UUAAGAA GGACAAAGGC AGCAAAUG \
AGAUC AAUUCUU CCUGUUUUCG UCGUUUAC U
UCGAUGAAGAAUACUUAU A^ GC UUGA UA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
| |
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| Mature sequence |
Adi-Mir-2022_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGGACAAAGGCUCCAAGCAAAUG -23
Get sequence
|
|---|
| Star sequence |
Adi-Mir-2022_3p* |
| mirBase accession | None |
|---|
| Sequence |
30- UUUGCUAGUUGCUUUUGUCCCGU -53
Get sequence
|
|---|
