| MirGeneDB ID | Nve-Mir-2022 |
|---|
| Family name |
MIR-2022 (all species) |
|---|
| Seed |
UUGCUAG |
|---|
| Species |
Starlet sea anemone (Nematostella vectensis) |
|---|
| MiRBase ID |
nve-mir-2022
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Adi-Mir-2022
Asp-Mir-2022-P1a
Asp-Mir-2022-P1b
Asp-Mir-2022-P1c
Hvu-Mir-2022
|
|---|
| Node of Origin (locus) |
Cnidaria
|
|---|
| Node of Origin (family) |
Cnidaria
|
|---|
Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834266.1: 501375-501426 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGAGAGUCGGGAUAAGAUCGCCUGAAAGUCGGGAUAAAUCAACUGUCAAGUGGUUGUCAUUUGCUAGUUGCUUUUGUCCCGCCUUUUCUGCGAAUUGAUCACGUGAUGUGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAGAGUCGGGAUAAGA-- CU U U-| U GU
UCGC GAAAG CGGGAUAAA CAACUG CAAGUG \
AGCG UUUUC GCCCUGUUU GUUGAU GUUUAC U
CAGUGUAGUGCACUAGUUA UC C UC^ C UG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Nve-Mir-2022_5p* |
| mirBase accession | MIMAT0032100 |
|---|
| Sequence |
0- GGGAUAAAUCAACUGUCAAGUG -22
Get sequence
|
|---|
| Mature sequence |
Nve-Mir-2022_3p |
| mirBase accession | MIMAT0009734 |
|---|
| Sequence |
29- UUUGCUAGUUGCUUUUGUCCCGC -52
Get sequence
|
|---|
