| MirGeneDB ID | Asp-Mir-2025 |
|---|
| Family name |
MIR-2025 (all species) |
|---|
| Seed |
UUUUUAG |
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| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Adi-Mir-2025
Nve-Mir-2025
|
|---|
| Node of Origin (locus) |
Hexacorallia
|
|---|
| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000577.1: 23005668-23005719 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGUACAACAAGAAAGGAAGGCCCUAUGCAAAGCUUUCGAUGGUUAGAAAAUCCUUGGAGAUUUUUUAGCCCGCGGAAGUUGUGCUGACGGGCCACAAAACAAAAAGGAGUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGUACAACAAGAAAGGAA- UAU-| A AU CU
GGCCC GCA AGCUUUCG GGUUAGAAAAUC U
CCGGG CGU UUGAAGGC CCGAUUUUUUAG G
GGUGAGGAAAAACAAAACA CAGU^ G GC AG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Asp-Mir-2025_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCUUUCGAUGGUUAGAAAAUC -22
Get sequence
|
|---|
| Mature sequence |
Asp-Mir-2025_3p |
| mirBase accession | None |
|---|
| Sequence |
30- UUUUUUAGCCCGCGGAAGUUGU -52
Get sequence
|
|---|
