MirGeneDB ID | Nve-Mir-2025 |
Family name |
MIR-2025 (all species) |
Seed |
UUUUUAG |
Species |
Starlet sea anemone (Nematostella vectensis) |
MiRBase ID |
nve-mir-2025
|
Paralogues |
|
Orthologues |
Adi-Mir-2025
Asp-Mir-2025
|
Node of Origin (locus) |
Hexacorallia
|
Node of Origin (family) |
Hexacorallia
|
Genome context (GCF_000209225.1_ASM20922v1_NVE) |
NW_001834363.1: 151679-151730 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAUAUGAUCAACAAUUAGGCCACAUACAAAGCUUUCGAUGGCUAGAAAAUCCUUAGUGAUUUUUUAGCCCGCGGAAGUUGUGUUGCCUGGCCAAUAUUACCAUUAGGGUGA
Get precursor sequence
|
Structure | 10 20 30 40 50
GAAUAUGAUCAACAAUUA- CAU-| A AU CU
GGCCA ACA AGCUUUCG GGCUAGAAAAUC U
CCGGU UGU UUGAAGGC CCGAUUUUUUAG A
AGUGGGAUUACCAUUAUAA CCGU^ G GC UG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Nve-Mir-2025_5p* |
mirBase accession | MIMAT0009759 |
Sequence |
0- AGCUUUCGAUGGCUAGAAAAUC -22
Get sequence
|
Mature sequence |
Nve-Mir-2025_3p |
mirBase accession | MIMAT0009760 |
Sequence |
30- UUUUUUAGCCCGCGGAAGUUGU -52
Get sequence
|