| MirGeneDB ID | Asp-Novel-1-P1 |
|---|
| Family name |
ASP-NOVEL-1 (all species) |
|---|
| Seed |
GCUACAU |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
|---|
| Paralogues |
Asp-Novel-1-P2
|
|---|
| Orthologues |
|
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| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000853.1: 19983586-19983639 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACAUUGAGUGACUACUGGUGCAGAACCUUACAGGUGUACCAAGUGUUACAAGAUAUAUGCCUUGCUACAUUUCGUACACCUGUAAGGUUUUUCACAUUCAUUGACUCCAGUCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAUUGAGUGACUACUG--| C C UA AUA
GUG AGAACCUUACAGGUGUAC AAGUGU CAAG U
CAC UUUUGGAAUGUCCACAUG UUUACA GUUC A
UACUGACCUCAGUUACUUA^ U C UC CGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Asp-Novel-1-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAGGUGUACCAAGUGUUACAAG -22
Get sequence
|
|---|
| Mature sequence |
Asp-Novel-1-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UGCUACAUUUCGUACACCUGUA -54
Get sequence
|
|---|
