| MirGeneDB ID | Asp-Novel-1-P2 |
|---|
| Family name |
ASP-NOVEL-1 (all species) |
|---|
| Seed |
GCUACAC |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Asp-Novel-1-P1
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000853.1: 19983974-19984027 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUCCAGUUAUCGUAAUGGUGCAGAACCUUGCAGGUGUACCAAGUGUAACAAGAUAUACGCCUUGCUACACUUCUUACACUUGUAAGGUUUUUUUCACAUUCAUGGACUACACUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUCCAGUUAUCGUAAUGGUGC--| CC A AUA
AGAACCUUGCAGGUGUA AAGUGUA CAAG U
UUUUGGAAUGUUCACAU UUCACAU GUUC A
CUCACAUCAGGUACUUACACUUU^ UC C CGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Asp-Novel-1-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAGGUGUACCAAGUGUAACAAG -22
Get sequence
|
|---|
| Mature sequence |
Asp-Novel-1-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UGCUACACUUCUUACACUUGUA -54
Get sequence
|
|---|
