| MirGeneDB ID | Ava-Novel-2-P1 |
|---|---|
| Family name | AVA-NOVEL-2 (all species) |
| Seed | CACCGGU |
| Species | Bdelloid rotifer (Adineta vaga) |
| MiRBase ID | |
| Paralogues | Ava-Novel-2-P2 |
| Orthologues | |
| Node of Origin (locus) | A. vaga |
| Node of Origin (family) | A. vaga |
| Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075497.1: 2491111-2491168 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | CAAACCAACAAGAAACUUUUUCAGACGCCAUCACCGGUUAUCAGGAACGCUUUGAUACAUGACUCGGCGUGUCUGUUCACCGGUGAAAACUGUUUGAAAGUCGUUUGUCAUAUACAAUGet precursor sequence |
| Structure | 10 20 30 40 50 CAAACCAACAAGAAACU- CCA-| UAU GA UUGAUA UUUUCAGACG UCACCGGU CAG ACGCU C GAAAGUUUGU AGUGGCCA GUC UGCGG A UAACAUAUACUGUUUGCU CAAA^ CUU UG CUCAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Ava-Novel-2-P1_5p |
| mirBase accession | None |
| Sequence |
0- UCACCGGUUAUCAGGAACGCU -21
Get sequence
|
| Star sequence | Ava-Novel-2-P1_3p* |
| mirBase accession | None |
| Sequence |
37- CGUGUCUGUUCACCGGUGAAA -58
Get sequence
|
