| MirGeneDB ID | Ava-Novel-6-P2 |
|---|
| Family name |
AVA-NOVEL-6 (all species) |
|---|
| Seed |
CACUGUA |
|---|
| Species |
Bdelloid rotifer (Adineta vaga) |
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| MiRBase ID |
|
|---|
| Paralogues |
Ava-Novel-6-P1
|
|---|
| Orthologues |
|
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| Node of Origin (locus) |
A. vaga
|
|---|
| Node of Origin (family) |
A. vaga
|
|---|
Genome context
(GCA_021613535.1_ASM2161353v1_AVA) |
CP075492.1: 12548112-12548173 [-]
Ensembl
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|---|
Precursor
(pre-Mir +30nt flank) |
UUUUCUCUGUUGAUAAUUCGAAAGUUUACUUCACUGUAUUUCCUACCUCGCUAUAGAGAUUGAAUCAGCGAGUGUAGGUAAUAGCAGUGGCUUGAAUUGUUUCGAAAGUACAUGCAUUAUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUUCUCUGUUGAUAAUU -- CU - U -| AUAGAG
CGAAA GUUUA UCACUG UAUU CCUAC CUCGCU A
GCUUU UAAGU GGUGAC AUAA GGAUG GAGCGA U
UUUAUUACGUACAUGAAA GU UC G U U^ CUAAGU
120 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Ava-Novel-6-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCACUGUAUUUCCUACCUCGCU -22
Get sequence
|
|---|
| Star sequence |
Ava-Novel-6-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CGAGUGUAGGUAAUAGCAGUGGCU -62
Get sequence
|
|---|
