| MirGeneDB ID | Ava-Novel-6-P2 |
|---|---|
| Family name | AVA-NOVEL-6 (all species) |
| Seed | CACUGUA |
| Species | Bdelloid rotifer (Adineta vaga) |
| MiRBase ID | |
| Paralogues | Ava-Novel-6-P1 |
| Orthologues | |
| Node of Origin (locus) | A. vaga |
| Node of Origin (family) | A. vaga |
| Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075492.1: 12548112-12548173 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUUCUCUGUUGAUAAUUCGAAAGUUUACUUCACUGUAUUUCCUACCUCGCUAUAGAGAUUGAAUCAGCGAGUGUAGGUAAUAGCAGUGGCUUGAAUUGUUUCGAAAGUACAUGCAUUAUUUGet precursor sequence |
| Structure | 10 20 30 40 50 UUUUCUCUGUUGAUAAUU -- CU - U -| AUAGAG CGAAA GUUUA UCACUG UAUU CCUAC CUCGCU A GCUUU UAAGU GGUGAC AUAA GGAUG GAGCGA U UUUAUUACGUACAUGAAA GU UC G U U^ CUAAGU 120 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Ava-Novel-6-P2_5p |
| mirBase accession | None |
| Sequence |
0- UCACUGUAUUUCCUACCUCGCU -22
Get sequence
|
| Star sequence | Ava-Novel-6-P2_3p* |
| mirBase accession | None |
| Sequence |
38- CGAGUGUAGGUAAUAGCAGUGGCU -62
Get sequence
|
